PROTEIN: C50_contig_11_1679
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Protein File & Metadata
Source:
C50_contig_11_1679.pdb
Genome ID:
Protein ID:
C50_contig_11_1679
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Detailed structural information will appear here after analysis...
Protein Sequence
MKNPYYRVWL AICFATLMSV QGYAQNKETA SRLATYFSPG TTDVISPDDD GFIRRWLLLE 60 PIDKPNRSNT VFTDSYIRKT FTTEYFPGQF TVLPKNGDKV KVGKQELTWH ALDSKLFNVK 120 LFRFASSLQK QIYGVLFWAV TVINCPEDIP NVRISVGSNS ASMWWLNGEE VVILSGDRRM 180 VKDDCLSKRL TLKKGKNIIR GAVINGPGMS DFCIRLLDEK GAPVKNITIS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1M021-F1-model_v4 | 28 | 232 | 74 | 282 | 0.3394 |
0.6214 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 27 | 232 | 378 | 701 | 0.5657 |
0.9618 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 27 | 232 | 382 | 700 | 0.5617 |
0.9531 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 31 | 232 | 483 | 697 | 0.5545 |
0.9587 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 1 | 232 | 1 | 1048 | 0.5086 |
0.8371 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 40 | 232 | 21 | 214 | 0.4657 |
0.8586 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 5 | 232 | 35 | 277 | 0.4357 |
0.7522 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 13 | 232 | 255 | 837 | 0.4274 |
0.7099 |
| A0A380YJ87 | GH20 | 14 | 232 | 255 | 837 | 0.4272 |
0.7135 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 47 | 221 | 458 | 622 | 0.4255 |
0.8614 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 20 | 221 | 14 | 201 | 0.4254 |
0.8227 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 27 | 232 | 378 | 701 | 0.5657 |
0.9618 |
| D7SFH3 | GH43_2 | 31 | 232 | 483 | 697 | 0.5545 |
0.9587 |
| A0A7G9XVI1 | GH43_2 , GH8 | 1 | 232 | 1 | 1048 | 0.5086 |
0.8371 |
| A0A380YJ87 | GH20 | 14 | 232 | 255 | 837 | 0.4272 |
0.7135 |
| A0A402CZV5 | GH4 | 47 | 221 | 458 | 622 | 0.4255 |
0.8614 |
| A0A344TID5 | GH163 | 20 | 221 | 14 | 201 | 0.4254 |
0.8227 |
| A0A1U9NQX6 | CBM51 , GH20 | 8 | 232 | 51 | 853 | 0.4247 |
0.6958 |
| BCM93550.1 | GH2 | 40 | 232 | 948 | 1135 | 0.4015 |
0.8213 |
| A0A518LMX6 | GH31 | 43 | 232 | 945 | 1147 | 0.3996 |
0.8125 |
| A0A1H1SHM5 | GH2 | 41 | 232 | 945 | 1132 | 0.3981 |
0.8121 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lhk-assembly2.cif.gz_B | 42 | 232 | 10 | 202 | 0.5455 |
0.6576 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.