PROTEIN: B50_contig_4164_803
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Protein File & Metadata
Source:
B50_contig_4164_803.pdb
Genome ID:
Protein ID:
B50_contig_4164_803
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Protein Sequence
MSQTSQVYAH LNEPAEKPEV SRFSEAVSRG SEYVRHQSSQ IRMPEFIMAF LLLFGEPVPG 60 VGLPFNQIVI IVLAVYGLTR KPTFDVSYFS GLRAIMFIAM GYLAIVSMYG VHSEDASDWT 120 RRLLRLVAAT VLIWVIAAGR LHIRSIVLGY SSAILFNAVG YFAGFAPSTG YVGYLTGWLG 180 DKNFSGLVYC LFGLLILSFA RNKIEVIGAI VVFSGLLWAT GSRTSMAAYA AGLIWVLVAH 240 RMKSAGRIAL GVVLYWLIDI LTSDYAQSGA FADRTGTDAL RSLIDQASEI KVQAAGFFGQ 300 GLGEAYVYLA HTGSKTWFFH NSYWSALVEG GWPWMILVVA ITLLIIVNVF SGKKTLPAKF 360 YVVQGAGVAI MICASRLGEV FYTWPWAIAC GLALRVLLLE REQRLGTGHD EASIEGFDER 420 IEVRDAEEAD NHVLATQNTH KA 442
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3H4H7-F1-model_v4 | 41 | 412 | 14 | 388 | 0.6573 |
0.7444 |
| AF-Q9HUG6-F1-model_v4 | 39 | 408 | 21 | 395 | 0.6571 |
0.7589 |
| AF-Q2G288-F1-model_v4 | 39 | 407 | 8 | 410 | 0.6483 |
0.7605 |
| AF-A0A5P3FVF2-F1-model_v4 | 39 | 430 | 14 | 400 | 0.6275 |
0.7168 |
| AF-Q9I1M9-F1-model_v4 | 42 | 407 | 45 | 459 | 0.6179 |
0.7793 |
| AF-Q5FA54-F1-model_v4 | 37 | 405 | 16 | 429 | 0.5552 |
0.7648 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 39 | 405 | 9 | 402 | 0.6022 |
0.7189 |
| AF-Q9K0K0-F1-model_v4 | GT0 | 37 | 405 | 16 | 429 | 0.5556 |
0.7644 |
| AF-G1FG65-F1-model_v4 | GT0 | 37 | 405 | 16 | 429 | 0.5543 |
0.7633 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 39 | 407 | 23 | 451 | 0.5438 |
0.8111 |
| AF-D5MJ04-F1-model_v4 | GT9 | 39 | 408 | 27 | 526 | 0.5047 |
0.7571 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 39 | 407 | 20 | 460 | 0.4942 |
0.7686 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 36 | 411 | 587 | 1044 | 0.4869 |
0.7938 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 41 | 420 | 24 | 422 | 0.4845 |
0.7389 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 30 | 405 | 1 | 408 | 0.615 |
0.7101 |
| A2S058 | GH39 | 39 | 405 | 9 | 402 | 0.6022 |
0.7189 |
| A0A517MXC4 | GT26 | 39 | 407 | 23 | 451 | 0.5438 |
0.8111 |
| D5MJ04 | GT9 | 39 | 408 | 27 | 526 | 0.5047 |
0.7571 |
| K2DNF3 | GT83 | 41 | 405 | 22 | 449 | 0.4981 |
0.8117 |
| B8IGI7 | GH16_7 | 39 | 407 | 20 | 460 | 0.4942 |
0.7686 |
| A0A160T1R3 | GH39 | 36 | 411 | 587 | 1044 | 0.4869 |
0.7938 |
| M4X4V7 | GH39 | 41 | 420 | 24 | 424 | 0.484 |
0.739 |
| K0J022 | GT4 | 40 | 407 | 10 | 434 | 0.4687 |
0.6999 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 39 | 408 | 21 | 395 | 0.6571 |
0.7589 |
| AF-Q6F7F9-F1-model_v4 | 39 | 405 | 10 | 407 | 0.5772 |
0.7685 |