PROTEIN: A6_contig_1141_1520
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Protein File & Metadata
Source:
A6_contig_1141_1520.pdb
Genome ID:
Protein ID:
A6_contig_1141_1520
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Protein Sequence
MKVLLMQQPK SFSNYPKWIE EIQERFNRLE VMVFTSNDRA AHHSWPNSVI KEIVVSDYSS 60 DSATAEFFDI VRKFKPDRII SSSEEDVLRV AEARSLFGIP GLQYELALRC RDKVTMKQTA 120 LNAGLKVIPY TSCKSFGDII SAFDRWKTVV LKPRWGAGSA GITILHSKDD LSVLATKPEF 180 VKNIHSNQYY LEEYCSGSVY HVDVVYINSD SILISPSRYL VPPLDFEKQN TGSVMLDEND 240 ADYSELLRLT KQLIESFKDQ TIPNVMHIEF YKNETGDFIF GEMAARRGGG LIKQELTAAY 300 GMDQSKANFL LELGLVDADT SITRSSQYGI LLETAGLNWP KEKEIPDWAV LESVGKKKGI 360 AHNSVDSDRK FLISGKNESE IIQRSNYLIK SRYDD 395
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPX0-F1-model_v4 | 1 | 393 | 2 | 392 | 0.8603 |
0.8887 |
| AF-K0F055-F1-model_v4 | 1 | 393 | 1 | 406 | 0.8423 |
0.8797 |
| AF-Q8CYX3-F1-model_v4 | 1 | 393 | 1 | 388 | 0.8087 |
0.8369 |
| AF-A0A077ZAN0-F1-model_v4 | 1 | 392 | 24 | 446 | 0.8024 |
0.8765 |
| AF-A0A077ZAW4-F1-model_v4 | 1 | 393 | 44 | 476 | 0.7746 |
0.8688 |
| AF-K0EW93-F1-model_v4 | 2 | 393 | 1 | 369 | 0.773 |
0.8207 |
| AF-K0EVG4-F1-model_v4 | 1 | 391 | 2 | 392 | 0.7698 |
0.8051 |
| AF-K0EVE1-F1-model_v4 | 1 | 393 | 7 | 410 | 0.7675 |
0.8091 |
| AF-P72158-F1-model_v4 | 1 | 392 | 1 | 358 | 0.7601 |
0.8219 |
| AF-Q2FZJ4-F1-model_v4 | 1 | 392 | 6 | 370 | 0.758 |
0.8188 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A075UWS8-F1-model_v4 | GT2 | 1 | 392 | 339 | 731 | 0.6076 |
0.8051 |
| AF-A0A193C563-F1-model_v4 | GT2 | 1 | 392 | 339 | 731 | 0.6073 |
0.8048 |
| AF-R4T1S0-F1-model_v4 | GT2 | 1 | 391 | 339 | 729 | 0.6068 |
0.806 |
| M2QHQ6 | GT2 | 1 | 392 | 339 | 730 | 0.6063 |
0.8033 |
| AF-A0A1H2I7W0-F1-model_v4 | GT2 | 1 | 391 | 339 | 729 | 0.6047 |
0.8032 |
| AF-A0A7G5J2Y3-F1-model_v4 | GT69 | 1 | 395 | 21 | 432 | 0.4779 |
0.6296 |
| AF-A0A7U2MMF9-F1-model_v4 | GT69 | 1 | 395 | 21 | 652 | 0.4733 |
0.6098 |
| AF-A0A2L0EWE4-F1-model_v4 | GT2 , GT25 | 1 | 376 | 760 | 1087 | 0.4344 |
0.7566 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| M2QHQ6 | GT2 | 1 | 392 | 339 | 730 | 0.6063 |
0.8033 |
| A0A7G5J2Y3 | GT69 | 1 | 395 | 21 | 432 | 0.4779 |
0.6296 |
| A0A2L0EWE4 | GT2 , GT25 | 1 | 376 | 760 | 1087 | 0.4344 |
0.7566 |
| A0A517KVN1 | PL4_3 | 1 | 355 | 470 | 940 | 0.4225 |
0.663 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4wd3-assembly1.cif.gz_B | 1 | 393 | 2 | 385 | 0.8103 |
0.8452 |
| 3vot-assembly1.cif.gz_A | 1 | 392 | 4 | 405 | 0.7705 |
0.8133 |
| 3vot-assembly2.cif.gz_B | 1 | 392 | 4 | 388 | 0.7681 |
0.8084 |
| 3orq-assembly1.cif.gz_A | 1 | 390 | 8 | 373 | 0.7662 |
0.8245 |
| 3k5h-assembly1.cif.gz_B | 1 | 393 | 3 | 378 | 0.7656 |
0.8107 |
| 3ax6-assembly1.cif.gz_B | 1 | 391 | 1 | 354 | 0.7589 |
0.8263 |
| 3k5i-assembly1.cif.gz_B | 1 | 393 | 4 | 374 | 0.7575 |
0.8084 |
| 3qff-assembly1.cif.gz_B | 1 | 392 | 5 | 373 | 0.7566 |
0.8125 |
| 3k5i-assembly2.cif.gz_D | 1 | 393 | 4 | 372 | 0.7554 |
0.8073 |
| 4ma0-assembly1.cif.gz_A | 1 | 392 | 1 | 360 | 0.7526 |
0.8164 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5UAT8-F1-model_v4 | 1 | 393 | 1 | 402 | 0.8363 |
0.8765 |
| AF-Q7A695-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7613 |
0.8171 |
| AF-Q6GAE8-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7612 |
0.817 |
| AF-Q99V32-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7606 |
0.8164 |
| AF-Q8NX94-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7605 |
0.8164 |
| AF-Q6GI19-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7601 |
0.816 |
| AF-P72158-F1-model_v4 | 1 | 392 | 1 | 358 | 0.7601 |
0.8219 |
| AF-P12045-F1-model_v4 | 1 | 392 | 6 | 373 | 0.759 |
0.8186 |
| AF-Q5HH19-F1-model_v4 | 1 | 392 | 6 | 370 | 0.7576 |
0.8184 |
| AF-Q5HQA5-F1-model_v4 | 1 | 392 | 6 | 373 | 0.7576 |
0.8144 |