PROTEIN: A15_contig_688_2398
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Protein File & Metadata
Source:
A15_contig_688_2398.pdb
Genome ID:
Protein ID:
A15_contig_688_2398
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Protein Sequence
MNPTDRREQR LQSYKKAQSE KEIYERVLAP TLYEYVLWVL QETLQSGKKR LYFLARDGYQ 60 MYLAAQQLCK QYDLDIECRY LKVSRYAVRV PEYHLLGERC LERICVGGID VTFEKIMQRA 120 ALTDKEAEEI AALAGYTENY RKVINYHEVM QLKDRLKKIP LLFHYIDRHS KEAYGTAIGY 180 LTQEGLLEPV PYALVDSGWI GTIQQSIEHL LRQKQPDRKL EGYYFGLYEI PEGEERENYH 240 SFYFTPWGEI KRKVHFSNSL FEAVFSAPEG MTLSYRTESG KDKIIYVPVT DSRENLNRER 300 ISRYICWLEE FLQEKKQSLP QADSGYVEEL LSPFMGNPTQ FEAEAYGSLL FSDDVREDDN 360 QKVSADFSEQ EIKNHHLLNR LLIMTGIRKK VLHESAWIEG SIASCKTLDE KGRARNRLHA 420 VFYKYIIYMR KWIKQNMIHG K 441
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 415 | 4 | 631 | 0.6673 |
0.8391 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 434 | 432 | 1091 | 0.5789 |
0.84 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 433 | 414 | 1067 | 0.5788 |
0.8362 |
| A0A1I7GMF6 | GT2 | 1 | 429 | 430 | 1083 | 0.5751 |
0.8417 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 16 | 423 | 9 | 403 | 0.5675 |
0.7643 |
| A0A974WXG9 | GT4 | 1 | 423 | 449 | 1078 | 0.564 |
0.8399 |
| A0A9J7AXY3 | GT2 | 17 | 429 | 8 | 399 | 0.5525 |
0.7844 |
| V4JBH5 | GT2 | 16 | 426 | 3 | 398 | 0.5504 |
0.7843 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 16 | 426 | 10 | 405 | 0.5436 |
0.7851 |
| AF-W8KPG0-F1-model_v4 | GT2 | 8 | 427 | 1 | 398 | 0.534 |
0.7785 |
| AF-M4S1R1-F1-model_v4 | GT4 | 1 | 422 | 4 | 699 | 0.5309 |
0.7804 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 433 | 414 | 1067 | 0.5788 |
0.8362 |
| A0A1I7GMF6 | GT2 | 1 | 429 | 430 | 1083 | 0.5751 |
0.8417 |
| A0A0U5F758 | GT2 | 16 | 423 | 9 | 403 | 0.5675 |
0.7643 |
| A0A974WXG9 | GT4 | 1 | 423 | 449 | 1078 | 0.564 |
0.8399 |
| A0A9J7AXY3 | GT2 | 17 | 429 | 8 | 399 | 0.5525 |
0.7844 |
| V4JBH5 | GT2 | 16 | 426 | 3 | 398 | 0.5504 |
0.7843 |
| A0A0H3KC95 | GT2 | 16 | 426 | 10 | 405 | 0.5436 |
0.7851 |
| W8KPG0 | GT2 | 8 | 427 | 1 | 398 | 0.534 |
0.7785 |
| M4S1R1 | GT4 | 1 | 422 | 4 | 699 | 0.5309 |
0.7804 |
| QRK05458.1 | GT4 | 1 | 440 | 25 | 992 | 0.5304 |
0.7774 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 1 | 349 | 233 | 591 | 0.5771 |
0.83 |
| 8a0m-assembly1.cif.gz_B | 1 | 422 | 258 | 876 | 0.5412 |
0.7767 |
| 8a0m-assembly2.cif.gz_C | 1 | 422 | 393 | 1024 | 0.5368 |
0.8034 |
| 8a0c-assembly1.cif.gz_A | 1 | 422 | 397 | 1028 | 0.5364 |
0.8036 |
| 8a0m-assembly1.cif.gz_A | 1 | 422 | 392 | 1023 | 0.5364 |
0.8025 |
| 8a0c-assembly1.cif.gz_B | 1 | 422 | 396 | 1025 | 0.5282 |
0.7906 |
| 8a0m-assembly2.cif.gz_D | 1 | 422 | 288 | 887 | 0.5086 |
0.7322 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.