Genome Details
Selected Rep_genome_ID: SW101_40_sub
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900021155
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0400 | 2,349,551 | 96.87% | 0% | United Kingdom | Europe | HRGM |
| MGYG000003952 | 2,320,359 | 96.88% | 0.48% | United Kingdom | Europe | UHGG |
| SW101_40_sub | 3,012,494 | 99.52% | 0.48% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW101_40_sub_CGC4 | CGCFAM_00128 | Yes | 8 | 3 | |
| SW101_40_sub_CGC9 | CGCFAM_00524 | Yes | 4 | 1 | |
| SW101_40_sub_CGC2 | CGCFAM_02118 | Yes | 5 | 1 | |
| SW101_40_sub_CGC10 | CGCFAM_02581 | Yes | 8 | 4 | |
| SW101_40_sub_CGC3 | CGCFAM_08408 | Yes | 13 | 8 |
Top CAZyme Families