Genome Details
Selected Rep_genome_ID: Rep_164
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_164 | 3,570,344 | 91.5127% | 1.2963% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_164_CGC10 | CGCFAM_00001 | Yes | 6 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_164_CGC17 | CGCFAM_00017 | Yes | 6 | 2 | fructan |
| Rep_164_CGC38 | CGCFAM_00034 | Yes | 6 | 1 | |
| Rep_164_CGC29 | CGCFAM_00073 | Yes | 10 | 6 | |
| Rep_164_CGC25 | CGCFAM_00146 | Yes | 5 | 3 | |
| Rep_164_CGC6 | CGCFAM_00148 | Yes | 5 | 1 | |
| Rep_164_CGC30 | CGCFAM_00379 | Yes | 6 | 2 | |
| Rep_164_CGC20 | CGCFAM_00897 | Yes | 6 | 2 | |
| Rep_164_CGC21 | CGCFAM_01821 | Yes | 6 | 2 | host glycan |
| Rep_164_CGC33 | CGCFAM_02500 | Yes | 5 | 1 | |
| Rep_164_CGC42 | CGCFAM_03968 | Yes | 6 | 4 | |
| Rep_164_CGC31 | CGCFAM_04639 | Yes | 7 | 3 | |
| Rep_164_CGC35 | CGCFAM_04642 | Yes | 3 | 1 | |
| Rep_164_CGC28 | CGCFAM_04685 | Yes | 8 | 2 | |
| Rep_164_CGC18 | CGCFAM_05281 | Yes | 3 | 1 | |
| Rep_164_CGC13 | CGCFAM_05518 | Yes | 6 | 3 | |
| Rep_164_CGC27 | CGCFAM_06003 | Yes | 5 | 1 | |
| Rep_164_CGC8 | CGCFAM_08612 | Yes | 8 | 3 |
Top CAZyme Families