dbCAN Logo

Cluster: Rep_164_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_164_c_310 Rep_164_c_310_2 1519 2517 + GT2
CAZyme Rep_164_c_310 Rep_164_c_310_3 2541 3347 + GT2
CAZyme Rep_164_c_310 Rep_164_c_310_4 3385 4560 + GT4
pfam Rep_164_c_310 Rep_164_c_310_5 4607 5980 + DUF6080
NULL(UNKNOWN) Rep_164_c_310 Rep_164_c_310_6 5984 6781 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_164_c_310 Rep_164_c_310_7 6808 8076 - 3.A.1.103.5
TC Rep_164_c_310 Rep_164_c_310_8 8086 8937 - 3.A.1.103.5
CAZyme Rep_164_c_310 Rep_164_c_310_9 9167 10393 - GT2
CAZyme Rep_164_c_310 Rep_164_c_310_10 10401 11564 - GT2
CAZyme Rep_164_c_310 Rep_164_c_310_11 11578 12474 - GT2
Gene ID: Rep_164_c_310_2
Type: CAZyme
Location: 1519 - 2517 (+)
Gene ID: Rep_164_c_310_3
Type: CAZyme
Location: 2541 - 3347 (+)
Gene ID: Rep_164_c_310_4
Type: CAZyme
Location: 3385 - 4560 (+)
Gene ID: Rep_164_c_310_5
Type: pfam
Location: 4607 - 5980 (+)
Gene ID: Rep_164_c_310_6
Type:
Location: 5984 - 6781 (-)
Gene ID: Rep_164_c_310_7
Type: TC
Location: 6808 - 8076 (-)
Gene ID: Rep_164_c_310_8
Type: TC
Location: 8086 - 8937 (-)
Gene ID: Rep_164_c_310_9
Type: CAZyme
Location: 9167 - 10393 (-)
Gene ID: Rep_164_c_310_10
Type: CAZyme
Location: 10401 - 11564 (-)
Gene ID: Rep_164_c_310_11
Type: CAZyme
Location: 11578 - 12474 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List