Genome Details
Selected Rep_genome_ID: Rep_130
Total Genomes Found: 10
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp900539625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR032396 | 2,486,881 | 96.19% | 0.19% | China | Asia | CGMR |
| DM052_55 | 2,766,601 | 98.05% | 0% | NA | Africa | H3AfricaPhase2 |
| GCA_021620475.1_ASM2162047v1_genomic | 2,500,177 | 97.12% | 0.37% | NA | Africa | H3AfricaPhase1 |
| GCA_021628275.1_ASM2162827v1_genomic | 2,985,120 | 94.31% | 0.74% | NA | Africa | H3AfricaPhase1 |
| GCA_021628885.1_ASM2162888v1_genomic | 2,507,014 | 97.68% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021630985.1_ASM2163098v1_genomic | 2,598,840 | 97.66% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021641235.1_ASM2164123v1_genomic | 2,600,318 | 95.82% | 0% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0166 | 2,741,108 | 98.04% | 0% | United Republic of Tanzania | Africa | HRGM |
| MGYG000004329 | 2,571,737 | 97.68% | 0% | Israel | Asia | UHGG |
| Rep_130 | 3,167,492 | 97.8625% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_130_CGC26 | CGCFAM_00028 | Yes | 8 | 4 | |
| Rep_130_CGC22 | CGCFAM_00151 | Yes | 3 | 2 | |
| Rep_130_CGC36 | CGCFAM_01875 | Yes | 7 | 3 | |
| Rep_130_CGC10 | CGCFAM_01891 | Yes | 3 | 1 | |
| Rep_130_CGC25 | CGCFAM_02906 | Yes | 3 | 1 | |
| Rep_130_CGC27 | CGCFAM_03277 | Yes | 5 | 3 | |
| Rep_130_CGC31 | CGCFAM_03350 | Yes | 3 | 1 | |
| Rep_130_CGC8 | CGCFAM_05905 | Yes | 3 | 1 | |
| Rep_130_CGC30 | CGCFAM_10972 | Yes | 7 | 3 |
Top CAZyme Families