dbCAN HGM

Cluster: Rep_130_CGC26

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_130_c_0	Rep_130_c_0_1679	2133464	2135566	+	3.A.3.6.5
pfam	Rep_130_c_0	Rep_130_c_0_1680	2136420	2136869	+	TonB_C
TC	Rep_130_c_0	Rep_130_c_0_1681	2136908	2137324	+	1.A.22.1.1
pfam	Rep_130_c_0	Rep_130_c_0_1682	2137452	2139530	+	Fasciclin
CAZyme	Rep_130_c_0	Rep_130_c_0_1683	2139971	2141929	+	GH133
CAZyme	Rep_130_c_0	Rep_130_c_0_1684	2142140	2143414	+	GT4
CAZyme	Rep_130_c_0	Rep_130_c_0_1685	2143487	2144899	+	GH57
CAZyme	Rep_130_c_0	Rep_130_c_0_1686	2145471	2146601	-	GT19

Gene ID: Rep_130_c_0_1679
Type: TC
Location: 2133464 - 2135566 (+)

Gene ID: Rep_130_c_0_1680
Type: pfam
Location: 2136420 - 2136869 (+)

Gene ID: Rep_130_c_0_1681
Type: TC
Location: 2136908 - 2137324 (+)

Gene ID: Rep_130_c_0_1682
Type: pfam
Location: 2137452 - 2139530 (+)

Gene ID: Rep_130_c_0_1683
Type: CAZyme
Location: 2139971 - 2141929 (+)

Gene ID: Rep_130_c_0_1684
Type: CAZyme
Location: 2142140 - 2143414 (+)

Gene ID: Rep_130_c_0_1685
Type: CAZyme
Location: 2143487 - 2144899 (+)

Gene ID: Rep_130_c_0_1686
Type: CAZyme
Location: 2145471 - 2146601 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.