Genome Details
Selected Rep_genome_ID: MGYG000003912
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella avicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG082_bin.10 | 2,227,564 | 91.54% | 0.84% | NA | Africa | H3AfricaPhase2 |
| B74.bin_29 | 2,829,868 | 98.14% | 2.87% | China(Inner Mongolia) | Asia | IMGG |
| GCA_021622845.1_ASM2162284v1_genomic | 2,549,297 | 98.14% | 3.04% | NA | Africa | H3AfricaPhase1 |
| MGYG000003912 | 2,374,877 | 96.06% | 0.68% | China | Asia | UHGG |
| Rep_263 | 2,299,652 | 96.3489% | 0.844595% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000003912_CGC4 | CGCFAM_00005 | Yes | 6 | 2 | |
| MGYG000003912_CGC16 | CGCFAM_00028 | Yes | 5 | 3 | |
| MGYG000003912_CGC29 | CGCFAM_00034 | Yes | 11 | 5 | |
| MGYG000003912_CGC35 | CGCFAM_00065 | Yes | 4 | 2 | |
| MGYG000003912_CGC3 | CGCFAM_00080 | Yes | 5 | 1 | |
| MGYG000003912_CGC15 | CGCFAM_00143 | Yes | 6 | 3 | |
| MGYG000003912_CGC31 | CGCFAM_00146 | Yes | 8 | 4 | |
| MGYG000003912_CGC19 | CGCFAM_00150 | Yes | 5 | 2 | |
| MGYG000003912_CGC34 | CGCFAM_00164 | Yes | 3 | 1 | |
| MGYG000003912_CGC6 | CGCFAM_00181 | Yes | 9 | 2 | |
| MGYG000003912_CGC24 | CGCFAM_00192 | Yes | 3 | 1 | |
| MGYG000003912_CGC14 | CGCFAM_00476 | Yes | 6 | 1 | |
| MGYG000003912_CGC38 | CGCFAM_00538 | Yes | 5 | 2 | |
| MGYG000003912_CGC12 | CGCFAM_00551 | Yes | 4 | 1 | |
| MGYG000003912_CGC13 | CGCFAM_00603 | Yes | 4 | 1 | |
| MGYG000003912_CGC40 | CGCFAM_00633 | Yes | 5 | 1 | |
| MGYG000003912_CGC9 | CGCFAM_00921 | Yes | 4 | 1 | |
| MGYG000003912_CGC18 | CGCFAM_01339 | Yes | 3 | 1 | |
| MGYG000003912_CGC42 | CGCFAM_03061 | Yes | 5 | 2 | |
| MGYG000003912_CGC39 | CGCFAM_05995 | Yes | 5 | 4 | |
| MGYG000003912_CGC20 | CGCFAM_06941 | Yes | 9 | 2 | |
| MGYG000003912_CGC37 | CGCFAM_10988 | Yes | 3 | 1 |
Top CAZyme Families