Cluster: MGYG000003912_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003912
- CGC Family ID: CGCFAM_00633
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003912_20 | MGYG000003912_20_12 | 11900 | 14899 | - | 2.A.6.4.3 |
| pfam | MGYG000003912_20 | MGYG000003912_20_13 | 15015 | 16106 | - | Exo_endo_phos |
| TC | MGYG000003912_20 | MGYG000003912_20_14 | 16135 | 16995 | - | 9.B.104.1.2 |
| pfam | MGYG000003912_20 | MGYG000003912_20_15 | 17263 | 17535 | + | Bac_DNA_binding | HU-HIG |
| CAZyme | MGYG000003912_20 | MGYG000003912_20_16 | 17895 | 18848 | - | CBM50 |
Gene ID: MGYG000003912_20_12
Type: TC
Location: 11900 - 14899 (-)
Type: TC
Location: 11900 - 14899 (-)
Gene ID: MGYG000003912_20_13
Type: pfam
Location: 15015 - 16106 (-)
Type: pfam
Location: 15015 - 16106 (-)
Gene ID: MGYG000003912_20_14
Type: TC
Location: 16135 - 16995 (-)
Type: TC
Location: 16135 - 16995 (-)
Gene ID: MGYG000003912_20_15
Type: pfam
Location: 17263 - 17535 (+)
Type: pfam
Location: 17263 - 17535 (+)
Gene ID: MGYG000003912_20_16
Type: CAZyme
Location: 17895 - 18848 (-)
Type: CAZyme
Location: 17895 - 18848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003912_20_15 | vegetarian > omnivore | 2.56719 | 0.02711 |
| MGYG000003912_20_15 | vegetarian > vegan | 3.64510 | 0.00878 |