Genome Details
Selected Rep_genome_ID: MGYG000000842
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540845
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000000842 | 1,846,287 | 100% | 0.81% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000000842_CGC22 | CGCFAM_00019 | Yes | 7 | 1 | |
| MGYG000000842_CGC14 | CGCFAM_00020 | Yes | 8 | 3 | host glycan/beta-glucan |
| MGYG000000842_CGC6 | CGCFAM_00074 | Yes | 8 | 4 | |
| MGYG000000842_CGC20 | CGCFAM_00176 | Yes | 6 | 1 | beta-glucan |
| MGYG000000842_CGC12 | CGCFAM_00191 | Yes | 8 | 1 | |
| MGYG000000842_CGC7 | CGCFAM_00309 | Yes | 4 | 1 | |
| MGYG000000842_CGC21 | CGCFAM_00325 | Yes | 5 | 1 | |
| MGYG000000842_CGC16 | CGCFAM_00427 | Yes | 3 | 1 | |
| MGYG000000842_CGC5 | CGCFAM_03826 | Yes | 10 | 1 | |
| MGYG000000842_CGC18 | CGCFAM_08295 | Yes | 11 | 4 | |
| MGYG000000842_CGC3 | CGCFAM_08296 | Yes | 4 | 1 |
Top CAZyme Families