Cluster: MGYG000000842_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000000842
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000842_6 | MGYG000000842_6_77 | 82167 | 83621 | - | GH1 |
| CAZyme | MGYG000000842_6 | MGYG000000842_6_78 | 83907 | 85337 | - | GH1 |
| pfam | MGYG000000842_6 | MGYG000000842_6_79 | 85696 | 86340 | - | DUF4867 |
| peptidase | MGYG000000842_6 | MGYG000000842_6_80 | 86464 | 87444 | - | S09.UPC |
| TC | MGYG000000842_6 | MGYG000000842_6_81 | 87550 | 88920 | - | 4.A.1.2.6 |
| pfam | MGYG000000842_6 | MGYG000000842_6_82 | 88989 | 89828 | - | PRD | PRD | CAT_RBD |
| STP | MGYG000000842_6 | MGYG000000842_6_83 | 90314 | 90748 | - | PfkB |
| CAZyme | MGYG000000842_6 | MGYG000000842_6_84 | 90968 | 92413 | - | GH1 |
Gene ID: MGYG000000842_6_77
Type: CAZyme
Location: 82167 - 83621 (-)
Type: CAZyme
Location: 82167 - 83621 (-)
Gene ID: MGYG000000842_6_78
Type: CAZyme
Location: 83907 - 85337 (-)
Type: CAZyme
Location: 83907 - 85337 (-)
Gene ID: MGYG000000842_6_79
Type: pfam
Location: 85696 - 86340 (-)
Type: pfam
Location: 85696 - 86340 (-)
Gene ID: MGYG000000842_6_80
Type: peptidase
Location: 86464 - 87444 (-)
Type: peptidase
Location: 86464 - 87444 (-)
Gene ID: MGYG000000842_6_81
Type: TC
Location: 87550 - 88920 (-)
Type: TC
Location: 87550 - 88920 (-)
Gene ID: MGYG000000842_6_82
Type: pfam
Location: 88989 - 89828 (-)
Type: pfam
Location: 88989 - 89828 (-)
Gene ID: MGYG000000842_6_83
Type: STP
Location: 90314 - 90748 (-)
Type: STP
Location: 90314 - 90748 (-)
Gene ID: MGYG000000842_6_84
Type: CAZyme
Location: 90968 - 92413 (-)
Type: CAZyme
Location: 90968 - 92413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.