Genome Details
Selected Rep_genome_ID: MGYG000000288
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902461085
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000000288 | 2,089,424 | 98.39% | 0.81% | Sweden | Europe | UHGG |
| ShaoY_2019_ERR3406104_bin.17 | 2,046,992 | 97.58% | 0.806% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000000288_CGC5 | CGCFAM_00008 | Yes | 5 | 1 | |
| MGYG000000288_CGC7 | CGCFAM_00014 | Yes | 13 | 3 | host glycan |
| MGYG000000288_CGC16 | CGCFAM_00191 | Yes | 5 | 1 | |
| MGYG000000288_CGC2 | CGCFAM_00880 | Yes | 6 | 1 |
Top CAZyme Families