Genome Details
Selected Rep_genome_ID: KY014_20
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000436115
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GCA_021630755.1_ASM2163075v1_genomic | 2,595,213 | 96.56% | 1.76% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2221 | 2,434,438 | 94.8% | 0.797% | United Republic of Tanzania | Africa | HRGM |
| KY014_20 | 2,849,318 | 97.58% | 1.33% | NA | Africa | H3AfricaPhase2 |
| MGYG000003486 | 2,822,689 | 97.58% | 2.02% | Fiji | Oceania | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_E_2_1315.313 | 2,848,856 | 96.14% | 1.28% | NA | Africa | Hadza |
| Rep_2206 | 2,595,117 | 94.2029% | 1.76329% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| KY014_20_CGC6 | CGCFAM_00009 | Yes | 11 | 5 | |
| KY014_20_CGC30 | CGCFAM_00021 | Yes | 6 | 1 | |
| KY014_20_CGC38 | CGCFAM_00021 | Yes | 4 | 2 | |
| KY014_20_CGC7 | CGCFAM_00037 | Yes | 7 | 2 | alpha-glucan |
| KY014_20_CGC45 | - | Yes | 7 | 3 | N/A |
| KY014_20_CGC46 | CGCFAM_00096 | Yes | 13 | 5 | |
| KY014_20_CGC20 | CGCFAM_00106 | Yes | 6 | 3 | alpha-glucan |
| KY014_20_CGC41 | CGCFAM_00125 | Yes | 8 | 1 | |
| KY014_20_CGC33 | CGCFAM_00193 | Yes | 9 | 5 | |
| KY014_20_CGC27 | CGCFAM_00287 | Yes | 24 | 14 | |
| KY014_20_CGC8 | CGCFAM_00323 | Yes | 7 | 1 | |
| KY014_20_CGC34 | CGCFAM_00330 | Yes | 5 | 1 | |
| KY014_20_CGC52 | CGCFAM_00686 | Yes | 6 | 1 | |
| KY014_20_CGC26 | CGCFAM_00967 | Yes | 4 | 1 | |
| KY014_20_CGC18 | CGCFAM_00974 | Yes | 5 | 1 | |
| KY014_20_CGC25 | CGCFAM_01258 | Yes | 3 | 1 | |
| KY014_20_CGC14 | CGCFAM_01583 | Yes | 3 | 2 | |
| KY014_20_CGC36 | CGCFAM_02893 | Yes | 3 | 1 | |
| KY014_20_CGC49 | CGCFAM_02898 | Yes | 3 | 1 | |
| KY014_20_CGC24 | CGCFAM_03035 | Yes | 9 | 3 | |
| KY014_20_CGC32 | CGCFAM_03380 | Yes | 9 | 2 | |
| KY014_20_CGC9 | CGCFAM_03403 | Yes | 5 | 2 | |
| KY014_20_CGC13 | CGCFAM_04275 | Yes | 4 | 1 | |
| KY014_20_CGC29 | CGCFAM_04455 | Yes | 9 | 1 |
Top CAZyme Families