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Cluster: KY014_20_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166152 k141_166152_223 268834 270708 - 1.A.33.1.4
pfam k141_166152 k141_166152_224 270774 271385 - GrpE
TF k141_166152 k141_166152_225 271401 272432 - 0043758
TC k141_166152 k141_166152_226 272630 273493 - 3.A.1.1.11
TC k141_166152 k141_166152_227 273493 274398 - 3.A.1.1.11
STP k141_166152 k141_166152_228 274477 275895 - SBP_bac_1
CAZyme k141_166152 k141_166152_229 275959 277902 - GH127
TF k141_166152 k141_166152_230 278246 279286 + LacI
CAZyme k141_166152 k141_166152_231 279310 280785 + GH51_1
Gene ID: k141_166152_223
Type: TC
Location: 268834 - 270708 (-)
Gene ID: k141_166152_224
Type: pfam
Location: 270774 - 271385 (-)
Gene ID: k141_166152_225
Type: TF
Location: 271401 - 272432 (-)
Gene ID: k141_166152_226
Type: TC
Location: 272630 - 273493 (-)
Gene ID: k141_166152_227
Type: TC
Location: 273493 - 274398 (-)
Gene ID: k141_166152_228
Type: STP
Location: 274477 - 275895 (-)
Gene ID: k141_166152_229
Type: CAZyme
Location: 275959 - 277902 (-)
Gene ID: k141_166152_230
Type: TF
Location: 278246 - 279286 (+)
Gene ID: k141_166152_231
Type: CAZyme
Location: 279310 - 280785 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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