Genome Details
Selected Rep_genome_ID: KY009_29
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp934725225
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| KY009_29 | 2,687,415 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_P_24_2355.29 | 2,517,875 | 99.3% | 0.04% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| KY009_29_CGC4 | CGCFAM_01771 | Yes | 7 | 1 | |
| KY009_29_CGC11 | CGCFAM_01794 | Yes | 13 | 2 | |
| KY009_29_CGC26 | CGCFAM_01978 | Yes | 5 | 1 | |
| KY009_29_CGC8 | CGCFAM_04094 | Yes | 9 | 3 | |
| KY009_29_CGC18 | CGCFAM_05906 | Yes | 5 | 2 | |
| KY009_29_CGC29 | CGCFAM_10411 | Yes | 8 | 3 |
Top CAZyme Families