Cluster: KY009_29_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: KY009_29
- CGC Family ID: CGCFAM_01771
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_319879 | k141_319879_56 | 49976 | 51175 | + | 3.A.1.1.2 |
| TC | k141_319879 | k141_319879_57 | 51433 | 52755 | + | 3.A.1.1.6 |
| TC | k141_319879 | k141_319879_58 | 52752 | 53594 | + | 3.A.1.1.6 |
| pfam | k141_319879 | k141_319879_59 | 53998 | 55125 | - | AAA_14 | DUF4143 |
| NULL(UNKNOWN) | k141_319879 | k141_319879_60 | 55370 | 56827 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_319879 | k141_319879_61 | 57191 | 59371 | + | GH35 |
| TC | k141_319879 | k141_319879_62 | 59682 | 61421 | + | 3.A.1.120.6 |
Gene ID: k141_319879_56
Type: TC
Location: 49976 - 51175 (+)
Type: TC
Location: 49976 - 51175 (+)
Gene ID: k141_319879_57
Type: TC
Location: 51433 - 52755 (+)
Type: TC
Location: 51433 - 52755 (+)
Gene ID: k141_319879_58
Type: TC
Location: 52752 - 53594 (+)
Type: TC
Location: 52752 - 53594 (+)
Gene ID: k141_319879_59
Type: pfam
Location: 53998 - 55125 (-)
Type: pfam
Location: 53998 - 55125 (-)
Gene ID: k141_319879_60
Type:
Location: 55370 - 56827 (-)
Type:
Location: 55370 - 56827 (-)
Gene ID: k141_319879_61
Type: CAZyme
Location: 57191 - 59371 (+)
Type: CAZyme
Location: 57191 - 59371 (+)
Gene ID: k141_319879_62
Type: TC
Location: 59682 - 61421 (+)
Type: TC
Location: 59682 - 61421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp934725225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.