Genome Details
Selected Rep_genome_ID: HRGMv2_3883
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Species
Rikenella faecigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3883 | 2,113,115 | 96.24% | 0.478% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3883_CGC5 | CGCFAM_00668 | Yes | 3 | 1 | |
| HRGMv2_3883_CGC11 | CGCFAM_00882 | Yes | 3 | 1 | |
| HRGMv2_3883_CGC18 | CGCFAM_02120 | Yes | 3 | 1 | |
| HRGMv2_3883_CGC21 | CGCFAM_03116 | Yes | 3 | 1 | |
| HRGMv2_3883_CGC10 | CGCFAM_04958 | Yes | 4 | 1 | |
| HRGMv2_3883_CGC3 | CGCFAM_06901 | Yes | 6 | 1 | |
| HRGMv2_3883_CGC8 | CGCFAM_08581 | Yes | 5 | 2 | |
| HRGMv2_3883_CGC16 | CGCFAM_10495 | Yes | 5 | 1 |
Top CAZyme Families