Genome Details
Selected Rep_genome_ID: HRGMv2_3201
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905202605
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3201 | 3,150,464 | 99.32% | 0.671% | Malaysia | Asia | HRGM |
| MGYG000004686 | 2,894,867 | 92.52% | 0.73% | China | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_A_10_1531.309 | 3,053,483 | 96.64% | 0.67% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3201_CGC4 | CGCFAM_00087 | Yes | 8 | 1 | |
| HRGMv2_3201_CGC12 | CGCFAM_00206 | Yes | 5 | 4 | |
| HRGMv2_3201_CGC7 | CGCFAM_00324 | Yes | 4 | 2 |
Top CAZyme Families