Cluster: HRGMv2_3201_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3201
- CGC Family ID: CGCFAM_00206
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3201_55 | HRGMv2_3201_55_1 | 19 | 2352 | - | GH2 |
| TC | HRGMv2_3201_55 | HRGMv2_3201_55_2 | 2358 | 4031 | - | 2.A.2.3.3 |
| CAZyme | HRGMv2_3201_55 | HRGMv2_3201_55_3 | 4072 | 5742 | - | GH78 |
| CAZyme | HRGMv2_3201_55 | HRGMv2_3201_55_4 | 5697 | 6332 | - | CBM67 |
| CAZyme | HRGMv2_3201_55 | HRGMv2_3201_55_5 | 6308 | 7666 | - | GH1 |
Gene ID: HRGMv2_3201_55_1
Type: CAZyme
Location: 19 - 2352 (-)
Type: CAZyme
Location: 19 - 2352 (-)
Gene ID: HRGMv2_3201_55_2
Type: TC
Location: 2358 - 4031 (-)
Type: TC
Location: 2358 - 4031 (-)
Gene ID: HRGMv2_3201_55_3
Type: CAZyme
Location: 4072 - 5742 (-)
Type: CAZyme
Location: 4072 - 5742 (-)
Gene ID: HRGMv2_3201_55_4
Type: CAZyme
Location: 5697 - 6332 (-)
Type: CAZyme
Location: 5697 - 6332 (-)
Gene ID: HRGMv2_3201_55_5
Type: CAZyme
Location: 6308 - 7666 (-)
Type: CAZyme
Location: 6308 - 7666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905202605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.