Genome Details
Selected Rep_genome_ID: HRGMv2_2783
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C54.bin_47 | 3,610,313 | 93.96% | 1.68% | China(Inner Mongolia) | Asia | IMGG |
| CGMR058586 | 3,187,413 | 94.63% | 1.01% | China | Asia | CGMR |
| HRGMv2_2783 | 3,523,704 | 91.72% | 0% | UK | Europe | HRGM |
| KY021_bin.33_sub | 3,215,115 | 93.96% | 0.73% | NA | Africa | H3AfricaPhase2 |
| MGYG000000370 | 2,729,121 | 94.63% | 1.01% | Sweden | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_J_1_RAJ1015YZ.161 | 2,635,494 | 94.63% | 0.67% | NA | Africa | Hadza |
| Rep_3149 | 3,461,447 | 94.6309% | 1.34228% | NA | NA | WIS |
| ShaoY_2019_ERR3406021_bin.18 | 3,257,964 | 93.95% | 1.006% | UK | Europe | ELGG |
| SPMP31_bin.114 | 2,643,041 | 93.12% | 2.35% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2783_CGC6 | CGCFAM_10181 | Yes | 8 | 1 |
Top CAZyme Families