Genome Details
Selected Rep_genome_ID: HRGMv2_1752
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR063266 | 2,049,645 | 99.43% | 0.23% | China | Asia | CGMR |
| CGMR070410 | 2,021,279 | 97.8% | 3.55% | China | Asia | CGMR |
| CGMR090969 | 2,085,062 | 99.43% | 0% | China | Asia | CGMR |
| CGMR094593 | 1,914,448 | 97.73% | 1.48% | China | Asia | CGMR |
| GH093_19 | 2,229,295 | 99.89% | 0.17% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_1752 | 2,131,197 | 99.88% | 0% | China | Asia | HRGM |
| MGYG000003126 | 1,973,834 | 99.89% | 0% | United States | North America | UHGG |
| Rep_939 | 2,073,486 | 99.0303% | 0.0227273% | NA | NA | WIS |
| SPMP42_bin.34 | 2,148,442 | 96.8% | 2.13% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1752_CGC6 | CGCFAM_00011 | Yes | 5 | 1 |
Top CAZyme Families