Cluster: HRGMv2_1752_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1752
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1752_2 | HRGMv2_1752_2_193 | 179855 | 180646 | + | 3.A.1.103.4 |
| TC | HRGMv2_1752_2 | HRGMv2_1752_2_194 | 180643 | 181380 | + | 3.A.1.103.1 |
| NULL(UNKNOWN) | HRGMv2_1752_2 | HRGMv2_1752_2_195 | 181383 | 182492 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_1752_2 | HRGMv2_1752_2_196 | 182521 | 183462 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1752_2 | HRGMv2_1752_2_197 | 183465 | 185213 | + | GT2 |
Gene ID: HRGMv2_1752_2_193
Type: TC
Location: 179855 - 180646 (+)
Type: TC
Location: 179855 - 180646 (+)
Gene ID: HRGMv2_1752_2_194
Type: TC
Location: 180643 - 181380 (+)
Type: TC
Location: 180643 - 181380 (+)
Gene ID: HRGMv2_1752_2_195
Type:
Location: 181383 - 182492 (+)
Type:
Location: 181383 - 182492 (+)
Gene ID: HRGMv2_1752_2_196
Type:
Location: 182521 - 183462 (+)
Type:
Location: 182521 - 183462 (+)
Gene ID: HRGMv2_1752_2_197
Type: CAZyme
Location: 183465 - 185213 (+)
Type: CAZyme
Location: 183465 - 185213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.