Genome Details
Selected Rep_genome_ID: HRGMv2_1463
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019419585
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1463 | 2,232,653 | 99.54% | 0.806% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1463_CGC13 | CGCFAM_00002 | Yes | 6 | 3 | |
| HRGMv2_1463_CGC1 | CGCFAM_00014 | Yes | 10 | 2 | host glycan |
| HRGMv2_1463_CGC8 | CGCFAM_00019 | Yes | 6 | 1 |
Top CAZyme Families