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Cluster: HRGMv2_1463_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1463_1 HRGMv2_1463_1_1 120 458 - 4.A.3.1.2
TF HRGMv2_1463_1 HRGMv2_1463_1_2 673 1677 - LacI
TC HRGMv2_1463_1 HRGMv2_1463_1_3 2034 3809 + 4.A.3.1.1
CAZyme HRGMv2_1463_1 HRGMv2_1463_1_4 3876 5315 + GH1
TF HRGMv2_1463_1 HRGMv2_1463_1_5 5660 6670 - LacI
TC HRGMv2_1463_1 HRGMv2_1463_1_6 6946 8724 + 4.A.3.1.1
CAZyme HRGMv2_1463_1 HRGMv2_1463_1_7 8800 10221 + GH1
TF HRGMv2_1463_1 HRGMv2_1463_1_8 10418 11182 - HTH_DeoR
sulfatase HRGMv2_1463_1 HRGMv2_1463_1_9 11389 12441 + S1_4
TC HRGMv2_1463_1 HRGMv2_1463_1_10 12526 13032 - 4.A.6.1.4
Gene ID: HRGMv2_1463_1_1
Type: TC
Location: 120 - 458 (-)
Gene ID: HRGMv2_1463_1_2
Type: TF
Location: 673 - 1677 (-)
Gene ID: HRGMv2_1463_1_3
Type: TC
Location: 2034 - 3809 (+)
Gene ID: HRGMv2_1463_1_4
Type: CAZyme
Location: 3876 - 5315 (+)
Gene ID: HRGMv2_1463_1_5
Type: TF
Location: 5660 - 6670 (-)
Gene ID: HRGMv2_1463_1_6
Type: TC
Location: 6946 - 8724 (+)
Gene ID: HRGMv2_1463_1_7
Type: CAZyme
Location: 8800 - 10221 (+)
Gene ID: HRGMv2_1463_1_8
Type: TF
Location: 10418 - 11182 (-)
Gene ID: HRGMv2_1463_1_9
Type: sulfatase
Location: 11389 - 12441 (+)
Gene ID: HRGMv2_1463_1_10
Type: TC
Location: 12526 - 13032 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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