Genome Details
Selected Rep_genome_ID: HRGMv2_1005
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1005 | 2,187,229 | 100% | 0.806% | UK | Europe | HRGM |
| MGYG000001581 | 2,156,880 | 97.58% | 4.11% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1005_CGC3 | CGCFAM_00014 | Yes | 13 | 3 | host glycan |
| HRGMv2_1005_CGC7 | CGCFAM_00428 | Yes | 3 | 1 |
Top CAZyme Families