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Cluster: HRGMv2_1005_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1005_2 HRGMv2_1005_2_1 490 972 + 4.A.6.1.4
sulfatase HRGMv2_1005_2 HRGMv2_1005_2_2 1297 2349 - S1_4
TF HRGMv2_1005_2 HRGMv2_1005_2_3 2554 3318 + HTH_DeoR
CAZyme HRGMv2_1005_2 HRGMv2_1005_2_4 3925 5346 - GH1
TC HRGMv2_1005_2 HRGMv2_1005_2_5 5423 7201 - 4.A.3.1.1
TF HRGMv2_1005_2 HRGMv2_1005_2_6 7477 8487 + LacI
TC HRGMv2_1005_2 HRGMv2_1005_2_7 8822 10582 - 4.A.3.1.1
CAZyme HRGMv2_1005_2 HRGMv2_1005_2_8 10759 12201 - GH1
TF HRGMv2_1005_2 HRGMv2_1005_2_9 12543 13580 + LacI
CAZyme HRGMv2_1005_2 HRGMv2_1005_2_10 13844 15283 - GH1
TC HRGMv2_1005_2 HRGMv2_1005_2_11 15350 17110 - 4.A.3.1.1
TF HRGMv2_1005_2 HRGMv2_1005_2_12 17415 18470 + LacI
TC HRGMv2_1005_2 HRGMv2_1005_2_13 18685 19023 + 4.A.3.1.2
Gene ID: HRGMv2_1005_2_1
Type: TC
Location: 490 - 972 (+)
Gene ID: HRGMv2_1005_2_2
Type: sulfatase
Location: 1297 - 2349 (-)
Gene ID: HRGMv2_1005_2_3
Type: TF
Location: 2554 - 3318 (+)
Gene ID: HRGMv2_1005_2_4
Type: CAZyme
Location: 3925 - 5346 (-)
Gene ID: HRGMv2_1005_2_5
Type: TC
Location: 5423 - 7201 (-)
Gene ID: HRGMv2_1005_2_6
Type: TF
Location: 7477 - 8487 (+)
Gene ID: HRGMv2_1005_2_7
Type: TC
Location: 8822 - 10582 (-)
Gene ID: HRGMv2_1005_2_8
Type: CAZyme
Location: 10759 - 12201 (-)
Gene ID: HRGMv2_1005_2_9
Type: TF
Location: 12543 - 13580 (+)
Gene ID: HRGMv2_1005_2_10
Type: CAZyme
Location: 13844 - 15283 (-)
Gene ID: HRGMv2_1005_2_11
Type: TC
Location: 15350 - 17110 (-)
Gene ID: HRGMv2_1005_2_12
Type: TF
Location: 17415 - 18470 (+)
Gene ID: HRGMv2_1005_2_13
Type: TC
Location: 18685 - 19023 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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