Genome Details
Selected Rep_genome_ID: HRGMv2_0990
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0990 | 2,382,469 | 96.77% | 1.572% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0990_CGC14 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| HRGMv2_0990_CGC6 | CGCFAM_00019 | Yes | 7 | 1 | |
| HRGMv2_0990_CGC11 | CGCFAM_00314 | Yes | 4 | 2 | |
| HRGMv2_0990_CGC4 | CGCFAM_00615 | Yes | 9 | 2 | |
| HRGMv2_0990_CGC17 | CGCFAM_01091 | Yes | 4 | 1 |
Top CAZyme Families