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Cluster: HRGMv2_0990_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0990_9 HRGMv2_0990_9_11 9332 10369 - GH13_30
CAZyme HRGMv2_0990_9 HRGMv2_0990_9_12 10474 11064 - GH13_30
STP HRGMv2_0990_9 HRGMv2_0990_9_13 11998 12744 - STAS
STP HRGMv2_0990_9 HRGMv2_0990_9_14 12826 15171 - GAF | SpoIIE
TC HRGMv2_0990_9 HRGMv2_0990_9_15 15919 16947 - 3.A.1.5.36
TC HRGMv2_0990_9 HRGMv2_0990_9_16 16947 18038 - 3.A.1.5.34
TC HRGMv2_0990_9 HRGMv2_0990_9_17 18041 18976 - 3.A.1.5.11
TC HRGMv2_0990_9 HRGMv2_0990_9_18 18991 20028 - 3.A.1.5.37
TC HRGMv2_0990_9 HRGMv2_0990_9_19 20185 21861 - 3.A.1.5.35
Gene ID: HRGMv2_0990_9_11
Type: CAZyme
Location: 9332 - 10369 (-)
Gene ID: HRGMv2_0990_9_12
Type: CAZyme
Location: 10474 - 11064 (-)
Gene ID: HRGMv2_0990_9_13
Type: STP
Location: 11998 - 12744 (-)
Gene ID: HRGMv2_0990_9_14
Type: STP
Location: 12826 - 15171 (-)
Gene ID: HRGMv2_0990_9_15
Type: TC
Location: 15919 - 16947 (-)
Gene ID: HRGMv2_0990_9_16
Type: TC
Location: 16947 - 18038 (-)
Gene ID: HRGMv2_0990_9_17
Type: TC
Location: 18041 - 18976 (-)
Gene ID: HRGMv2_0990_9_18
Type: TC
Location: 18991 - 20028 (-)
Gene ID: HRGMv2_0990_9_19
Type: TC
Location: 20185 - 21861 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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