Genome Details
Selected Rep_genome_ID: HRGMv2_0911
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0911 | 2,057,653 | 99.73% | 0% | Malaysia | Asia | HRGM |
| HRGMv2_1564 | 1,868,228 | 93.49% | 0.403% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0911_CGC3 | CGCFAM_00014 | Yes | 14 | 3 | host glycan |
| HRGMv2_0911_CGC11 | CGCFAM_00413 | Yes | 7 | 2 |
Top CAZyme Families