Genome Details
Selected Rep_genome_ID: HRGMv2_0909
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937965595
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0909 | 1,943,748 | 96.93% | 0% | UK | Europe | HRGM |
| MurphyR_2019_SRR7352036_bin.2 | 2,157,558 | 100% | 0.806% | New_Zealand | Oceania | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0909_CGC16 | CGCFAM_00014 | Yes | 5 | 2 | host glycan |
| HRGMv2_0909_CGC14 | CGCFAM_00929 | Yes | 7 | 2 | |
| HRGMv2_0909_CGC10 | CGCFAM_01141 | Yes | 9 | 2 | |
| HRGMv2_0909_CGC2 | CGCFAM_03181 | Yes | 7 | 1 |
Top CAZyme Families