Genome Details
Selected Rep_genome_ID: HRGMv2_0903
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0903 | 2,199,802 | 100% | 0.806% | Japan | Asia | HRGM |
| MGYG000004332 | 2,106,771 | 100% | 0.81% | Israel | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0903_CGC11 | CGCFAM_00011 | Yes | 9 | 6 | |
| HRGMv2_0903_CGC15 | CGCFAM_00042 | Yes | 5 | 1 | beta-glucan |
| HRGMv2_0903_CGC3 | CGCFAM_00090 | Yes | 4 | 2 |
Top CAZyme Families