Genome Details
Selected Rep_genome_ID: HRGMv2_0861
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp019041915
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR053062 | 2,115,902 | 100% | 0.81% | China | Asia | CGMR |
| HRGMv2_0861 | 2,138,983 | 100% | 0.806% | US | North America | HRGM |
| HRGMv2_0901 | 2,111,610 | 99.19% | 0.806% | United Kingdom | Europe | HRGM |
| MGYG000001986 | 2,055,219 | 100% | 0.81% | Spain | Europe | UHGG |
| MGYG000002746 | 1,928,914 | 100% | 0.81% | Netherlands | Europe | UHGG |
| VatanenT_2016_SRR4408283_bin.10 | 2,189,226 | 99.19% | 0.806% | Finland | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0861_CGC15 | CGCFAM_00024 | Yes | 19 | 2 | |
| HRGMv2_0861_CGC16 | CGCFAM_00615 | Yes | 4 | 1 |
Top CAZyme Families