Genome Details
Selected Rep_genome_ID: HRGMv2_0528
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas gingivalis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0528 | 1,975,309 | 96.65% | 0.435% | Japan | Asia | HRGM |
| MGYG000003300 | 1,801,215 | 93.12% | 0.63% | Mongolia | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0528_CGC16 | CGCFAM_00028 | Yes | 6 | 3 | |
| HRGMv2_0528_CGC6 | CGCFAM_00072 | Yes | 3 | 1 | |
| HRGMv2_0528_CGC17 | CGCFAM_00764 | Yes | 7 | 2 | |
| HRGMv2_0528_CGC9 | CGCFAM_00808 | Yes | 5 | 1 | |
| HRGMv2_0528_CGC18 | CGCFAM_01108 | Yes | 3 | 1 | |
| HRGMv2_0528_CGC13 | CGCFAM_01224 | Yes | 8 | 1 | |
| HRGMv2_0528_CGC7 | CGCFAM_02083 | Yes | 3 | 1 | |
| HRGMv2_0528_CGC12 | CGCFAM_02710 | Yes | 4 | 2 | |
| HRGMv2_0528_CGC10 | CGCFAM_09707 | Yes | 3 | 2 | |
| HRGMv2_0528_CGC14 | CGCFAM_09708 | Yes | 5 | 2 |
Top CAZyme Families