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Cluster: HRGMv2_0528_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0528_76 HRGMv2_0528_76_39 42165 43118 + GT2
STP HRGMv2_0528_76 HRGMv2_0528_76_40 43118 43657 + Nitroreductase | Nitroreductase
sulfatase HRGMv2_0528_76 HRGMv2_0528_76_41 43654 44667 + S1_16
TC HRGMv2_0528_76 HRGMv2_0528_76_42 44886 45458 - 3.D.6.1.2
TC HRGMv2_0528_76 HRGMv2_0528_76_43 45483 46073 - 3.D.6.1.2
TC HRGMv2_0528_76 HRGMv2_0528_76_44 46070 46747 - 3.D.6.1.1
TC HRGMv2_0528_76 HRGMv2_0528_76_45 46744 47727 - 3.D.6.1.2
TC HRGMv2_0528_76 HRGMv2_0528_76_46 47743 49074 - 3.D.6.1.2
Gene ID: HRGMv2_0528_76_39
Type: CAZyme
Location: 42165 - 43118 (+)
Gene ID: HRGMv2_0528_76_40
Type: STP
Location: 43118 - 43657 (+)
Gene ID: HRGMv2_0528_76_41
Type: sulfatase
Location: 43654 - 44667 (+)
Gene ID: HRGMv2_0528_76_42
Type: TC
Location: 44886 - 45458 (-)
Gene ID: HRGMv2_0528_76_43
Type: TC
Location: 45483 - 46073 (-)
Gene ID: HRGMv2_0528_76_44
Type: TC
Location: 46070 - 46747 (-)
Gene ID: HRGMv2_0528_76_45
Type: TC
Location: 46744 - 47727 (-)
Gene ID: HRGMv2_0528_76_46
Type: TC
Location: 47743 - 49074 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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