Genome Details
Selected Rep_genome_ID: HRGMv2_0391
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900550645
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0391 | 2,487,592 | 98.3% | 0% | Malaysia | Asia | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_D_7_CHE0004BZ.149 | 2,418,743 | 96.04% | 0% | NA | Africa | Hadza |
| Rep_288 | 2,578,873 | 96.5779% | 1.50943% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0391_CGC1 | CGCFAM_00356 | Yes | 7 | 1 | |
| HRGMv2_0391_CGC6 | CGCFAM_00556 | Yes | 5 | 1 | |
| HRGMv2_0391_CGC18 | CGCFAM_00559 | Yes | 4 | 1 | |
| HRGMv2_0391_CGC10 | CGCFAM_00743 | Yes | 4 | 1 | |
| HRGMv2_0391_CGC2 | CGCFAM_00878 | Yes | 5 | 1 | |
| HRGMv2_0391_CGC9 | CGCFAM_01393 | Yes | 4 | 1 | |
| HRGMv2_0391_CGC8 | CGCFAM_01890 | Yes | 4 | 1 | |
| HRGMv2_0391_CGC11 | CGCFAM_02866 | Yes | 7 | 1 | |
| HRGMv2_0391_CGC12 | CGCFAM_04002 | Yes | 3 | 1 | |
| HRGMv2_0391_CGC3 | CGCFAM_07230 | Yes | 4 | 1 | |
| HRGMv2_0391_CGC13 | CGCFAM_09647 | Yes | 5 | 1 |
Top CAZyme Families