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Cluster: HRGMv2_0391_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0391_18 HRGMv2_0391_18_13 16160 16924 - GT2
STP HRGMv2_0391_18 HRGMv2_0391_18_14 17122 17289 + Fer4 | Fer4
TC HRGMv2_0391_18 HRGMv2_0391_18_15 17425 18165 + 1.B.44.1.2
pfam HRGMv2_0391_18 HRGMv2_0391_18_16 18162 19175 + PorP_SprF
TC HRGMv2_0391_18 HRGMv2_0391_18_17 19187 20665 + 9.A.25.1.1
TC HRGMv2_0391_18 HRGMv2_0391_18_18 20705 21703 + 9.A.25.1.1
TC HRGMv2_0391_18 HRGMv2_0391_18_19 21710 23275 + 9.A.25.1.1
Gene ID: HRGMv2_0391_18_13
Type: CAZyme
Location: 16160 - 16924 (-)
Gene ID: HRGMv2_0391_18_14
Type: STP
Location: 17122 - 17289 (+)
Gene ID: HRGMv2_0391_18_15
Type: TC
Location: 17425 - 18165 (+)
Gene ID: HRGMv2_0391_18_16
Type: pfam
Location: 18162 - 19175 (+)
Gene ID: HRGMv2_0391_18_17
Type: TC
Location: 19187 - 20665 (+)
Gene ID: HRGMv2_0391_18_18
Type: TC
Location: 20705 - 21703 (+)
Gene ID: HRGMv2_0391_18_19
Type: TC
Location: 21710 - 23275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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