Genome Details
Selected Rep_genome_ID: HRGMv2_0389
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola gallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR057080 | 3,200,928 | 97.92% | 3.18% | China | Asia | CGMR |
| HRGMv2_0389 | 3,258,483 | 98.87% | 0% | Luxembourg | Europe | HRGM |
| Rep_504 | 2,985,236 | 96.5772% | 0.124844% | NA | NA | WIS |
| VatanenT_2016_SRR4305192_bin.3 | 3,516,342 | 98.51% | 0.309% | Estonia | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0389_CGC14 | CGCFAM_03753 | Yes | 3 | 1 | |
| HRGMv2_0389_CGC50 | CGCFAM_06645 | Yes | 7 | 1 |
Top CAZyme Families