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Cluster: HRGMv2_0389_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_37 HRGMv2_0389_37_4 3507 5006 + 9.B.160.1.10
STP HRGMv2_0389_37 HRGMv2_0389_37_5 5222 6082 + Sigma70_r2 | Sigma70_r3 | Sigma70_r4
pfam HRGMv2_0389_37 HRGMv2_0389_37_6 6205 7215 - ApbE
TC HRGMv2_0389_37 HRGMv2_0389_37_7 7231 7809 - 2.A.107.1.2
pfam HRGMv2_0389_37 HRGMv2_0389_37_8 7810 8529 - DUF6048
pfam HRGMv2_0389_37 HRGMv2_0389_37_9 8480 8974 - DUF6452
CAZyme HRGMv2_0389_37 HRGMv2_0389_37_10 8979 9929 - GT2
Gene ID: HRGMv2_0389_37_4
Type: TC
Location: 3507 - 5006 (+)
Gene ID: HRGMv2_0389_37_5
Type: STP
Location: 5222 - 6082 (+)
Gene ID: HRGMv2_0389_37_6
Type: pfam
Location: 6205 - 7215 (-)
Gene ID: HRGMv2_0389_37_7
Type: TC
Location: 7231 - 7809 (-)
Gene ID: HRGMv2_0389_37_8
Type: pfam
Location: 7810 - 8529 (-)
Gene ID: HRGMv2_0389_37_9
Type: pfam
Location: 8480 - 8974 (-)
Gene ID: HRGMv2_0389_37_10
Type: CAZyme
Location: 8979 - 9929 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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