Genome Details
Selected Rep_genome_ID: HRGMv2_0290
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Species
Rikenella microfusus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0290 | 2,706,592 | 100% | 0% | Japan | Asia | HRGM |
| MGYG000003926 | 2,402,156 | 94.83% | 0.18% | China | Asia | UHGG |
| Rep_591 | 2,397,681 | 93.3014% | 0.478469% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0290_CGC6 | CGCFAM_00002 | Yes | 5 | 3 | |
| HRGMv2_0290_CGC31 | CGCFAM_00071 | Yes | 6 | 2 | |
| HRGMv2_0290_CGC38 | CGCFAM_00377 | Yes | 3 | 2 | |
| HRGMv2_0290_CGC15 | CGCFAM_00882 | Yes | 5 | 2 | |
| HRGMv2_0290_CGC10 | CGCFAM_01093 | Yes | 5 | 1 | |
| HRGMv2_0290_CGC27 | CGCFAM_01115 | Yes | 3 | 2 | |
| HRGMv2_0290_CGC1 | CGCFAM_01942 | Yes | 4 | 1 | |
| HRGMv2_0290_CGC32 | CGCFAM_03885 | Yes | 5 | 1 | |
| HRGMv2_0290_CGC8 | CGCFAM_04344 | Yes | 3 | 1 | |
| HRGMv2_0290_CGC9 | CGCFAM_05525 | Yes | 3 | 1 | |
| HRGMv2_0290_CGC12 | CGCFAM_05805 | Yes | 4 | 1 | |
| HRGMv2_0290_CGC22 | CGCFAM_05968 | Yes | 3 | 1 | |
| HRGMv2_0290_CGC24 | CGCFAM_08582 | Yes | 12 | 5 | |
| HRGMv2_0290_CGC14 | CGCFAM_08898 | Yes | 3 | 1 |
Top CAZyme Families