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Cluster: HRGMv2_0290_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0290_44 HRGMv2_0290_44_11 15434 16096 - 9.B.27.2.3
TC HRGMv2_0290_44 HRGMv2_0290_44_12 16487 17833 - 2.A.6.2.18
TC HRGMv2_0290_44 HRGMv2_0290_44_13 17847 20969 - 2.A.6.2.16
TC HRGMv2_0290_44 HRGMv2_0290_44_14 21020 22171 - 2.A.6.2.23
TC HRGMv2_0290_44 HRGMv2_0290_44_15 22239 22616 - 9.B.55.2.1
pfam HRGMv2_0290_44 HRGMv2_0290_44_16 23074 24435 + Aldedh
pfam HRGMv2_0290_44 HRGMv2_0290_44_17 24506 24958 + PepSY_like | PepSY_like
CAZyme HRGMv2_0290_44 HRGMv2_0290_44_18 25040 26287 - GH154
CAZyme HRGMv2_0290_44 HRGMv2_0290_44_19 26287 27525 - GH154
CAZyme HRGMv2_0290_44 HRGMv2_0290_44_20 27522 29765 - GH89
CAZyme HRGMv2_0290_44 HRGMv2_0290_44_21 29793 31751 - PL33_1
CAZyme HRGMv2_0290_44 HRGMv2_0290_44_22 31767 32972 - GH88
Gene ID: HRGMv2_0290_44_11
Type: TC
Location: 15434 - 16096 (-)
Gene ID: HRGMv2_0290_44_12
Type: TC
Location: 16487 - 17833 (-)
Gene ID: HRGMv2_0290_44_13
Type: TC
Location: 17847 - 20969 (-)
Gene ID: HRGMv2_0290_44_14
Type: TC
Location: 21020 - 22171 (-)
Gene ID: HRGMv2_0290_44_15
Type: TC
Location: 22239 - 22616 (-)
Gene ID: HRGMv2_0290_44_16
Type: pfam
Location: 23074 - 24435 (+)
Gene ID: HRGMv2_0290_44_17
Type: pfam
Location: 24506 - 24958 (+)
Gene ID: HRGMv2_0290_44_18
Type: CAZyme
Location: 25040 - 26287 (-)
Gene ID: HRGMv2_0290_44_19
Type: CAZyme
Location: 26287 - 27525 (-)
Gene ID: HRGMv2_0290_44_20
Type: CAZyme
Location: 27522 - 29765 (-)
Gene ID: HRGMv2_0290_44_21
Type: CAZyme
Location: 29793 - 31751 (-)
Gene ID: HRGMv2_0290_44_22
Type: CAZyme
Location: 31767 - 32972 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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