Genome Details
Selected Rep_genome_ID: HRGMv2_0069
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR060832 | 2,037,886 | 97% | 1% | China | Asia | CGMR |
| HRGMv2_0062 | 2,270,973 | 99% | 0% | South Korea | Asia | HRGM |
| HRGMv2_0068 | 2,146,434 | 96.48% | 0.333% | South Korea | Asia | HRGM |
| HRGMv2_0069 | 2,278,474 | 99.33% | 0% | China | Asia | HRGM |
| MGYG000004883 | 2,241,611 | 99.33% | 0% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0069_CGC5 | CGCFAM_02621 | Yes | 10 | 4 | |
| HRGMv2_0069_CGC7 | CGCFAM_03392 | Yes | 9 | 5 | |
| HRGMv2_0069_CGC9 | CGCFAM_04955 | Yes | 8 | 1 |
Top CAZyme Families