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Cluster: HRGMv2_0069_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0069_4 HRGMv2_0069_4_2 1050 2678 - 4.A.1.2.12
TC HRGMv2_0069_4 HRGMv2_0069_4_3 2937 3047 - 4.A.1.2.12
CAZyme HRGMv2_0069_4 HRGMv2_0069_4_4 3289 4830 - GH32
pfam HRGMv2_0069_4 HRGMv2_0069_4_5 5158 5535 - Ribosomal_L12 | Ribosomal_L12_N
pfam HRGMv2_0069_4 HRGMv2_0069_4_6 5690 6220 - Ribosomal_L10
TC HRGMv2_0069_4 HRGMv2_0069_4_7 6619 7797 - 3.A.1.11.6
TC HRGMv2_0069_4 HRGMv2_0069_4_8 7875 8849 - 2.A.16.1.1
TC HRGMv2_0069_4 HRGMv2_0069_4_9 9115 9810 - 1.C.82.1.1
Gene ID: HRGMv2_0069_4_2
Type: TC
Location: 1050 - 2678 (-)
Gene ID: HRGMv2_0069_4_3
Type: TC
Location: 2937 - 3047 (-)
Gene ID: HRGMv2_0069_4_4
Type: CAZyme
Location: 3289 - 4830 (-)
Gene ID: HRGMv2_0069_4_5
Type: pfam
Location: 5158 - 5535 (-)
Gene ID: HRGMv2_0069_4_6
Type: pfam
Location: 5690 - 6220 (-)
Gene ID: HRGMv2_0069_4_7
Type: TC
Location: 6619 - 7797 (-)
Gene ID: HRGMv2_0069_4_8
Type: TC
Location: 7875 - 8849 (-)
Gene ID: HRGMv2_0069_4_9
Type: TC
Location: 9115 - 9810 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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