Genome Details
Selected Rep_genome_ID: GH172_103
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp002438605
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR026610 | 2,127,456 | 98.66% | 0% | China | Asia | CGMR |
| GH172_103 | 2,194,518 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
| MGYG000001940 | 2,341,596 | 98.66% | 0% | Denmark | Europe | UHGG |
| Rep_3483 | 2,223,650 | 97.9866% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH172_103_CGC24 | CGCFAM_00074 | Yes | 4 | 2 | |
| GH172_103_CGC17 | CGCFAM_00766 | Yes | 4 | 1 | |
| GH172_103_CGC6 | CGCFAM_00916 | Yes | 3 | 1 | |
| GH172_103_CGC14 | CGCFAM_02480 | Yes | 4 | 1 | |
| GH172_103_CGC15 | CGCFAM_02919 | Yes | 5 | 2 | |
| GH172_103_CGC19 | CGCFAM_04367 | Yes | 8 | 2 |
Top CAZyme Families