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Cluster: GH172_103_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_131294 k141_131294_23 22795 25212 - GH48
TC k141_131294 k141_131294_24 25998 27029 + 3.A.1.132.9
TC k141_131294 k141_131294_25 27031 27762 + 3.A.1.132.1
pfam k141_131294 k141_131294_26 27769 29256 + ABC_transp_aux
pfam k141_131294 k141_131294_27 29256 30638 + DUF4340 | DUF4340
CAZyme k141_131294 k141_131294_28 30795 31685 - CBM63
pfam k141_131294 k141_131294_29 31821 33005 - GHL10
TC k141_131294 k141_131294_30 33199 34425 - 2.A.37.2.2
Gene ID: k141_131294_23
Type: CAZyme
Location: 22795 - 25212 (-)
Gene ID: k141_131294_24
Type: TC
Location: 25998 - 27029 (+)
Gene ID: k141_131294_25
Type: TC
Location: 27031 - 27762 (+)
Gene ID: k141_131294_26
Type: pfam
Location: 27769 - 29256 (+)
Gene ID: k141_131294_27
Type: pfam
Location: 29256 - 30638 (+)
Gene ID: k141_131294_28
Type: CAZyme
Location: 30795 - 31685 (-)
Gene ID: k141_131294_29
Type: pfam
Location: 31821 - 33005 (-)
Gene ID: k141_131294_30
Type: TC
Location: 33199 - 34425 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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