Genome Details
Selected Rep_genome_ID: GH147_17_sub
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAKQTH01
Species
CAKQTH01 sp934276635
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH147_17_sub | 1,293,314 | 94.62% | 0.18% | NA | Africa | H3AfricaPhase2 |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_F_16_1210.152 | 1,318,625 | 91.4% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH147_17_sub_CGC3 | CGCFAM_00472 | Yes | 5 | 3 | |
| GH147_17_sub_CGC6 | CGCFAM_01598 | Yes | 7 | 2 | |
| GH147_17_sub_CGC2 | CGCFAM_02843 | Yes | 4 | 1 |
Top CAZyme Families