Cluster: GH147_17_sub_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: GH147_17_sub
- CGC Family ID: CGCFAM_01598
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_420679 | k141_420679_25 | 22767 | 23939 | + | GT4 |
| pfam | k141_420679 | k141_420679_26 | 23942 | 25864 | + | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| CAZyme | k141_420679 | k141_420679_27 | 25962 | 28454 | - | GT35 |
| TC | k141_420679 | k141_420679_28 | 28592 | 29944 | + | 1.B.17.1.4 |
| NULL(UNKNOWN) | k141_420679 | k141_420679_29 | 29996 | 30289 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_420679 | k141_420679_30 | 30391 | 33027 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| TC | k141_420679 | k141_420679_31 | 33039 | 33677 | + | 9.B.186.1.2 |
Gene ID: k141_420679_25
Type: CAZyme
Location: 22767 - 23939 (+)
Type: CAZyme
Location: 22767 - 23939 (+)
Gene ID: k141_420679_26
Type: pfam
Location: 23942 - 25864 (+)
Type: pfam
Location: 23942 - 25864 (+)
Gene ID: k141_420679_27
Type: CAZyme
Location: 25962 - 28454 (-)
Type: CAZyme
Location: 25962 - 28454 (-)
Gene ID: k141_420679_28
Type: TC
Location: 28592 - 29944 (+)
Type: TC
Location: 28592 - 29944 (+)
Gene ID: k141_420679_29
Type:
Location: 29996 - 30289 (+)
Type:
Location: 29996 - 30289 (+)
Gene ID: k141_420679_30
Type: pfam
Location: 30391 - 33027 (+)
Type: pfam
Location: 30391 - 33027 (+)
Gene ID: k141_420679_31
Type: TC
Location: 33039 - 33677 (+)
Type: TC
Location: 33039 - 33677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAKQTH01
Species
CAKQTH01 sp934276635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.