Genome Details
Selected Rep_genome_ID: GH100_bin.32
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
RUG410
Species
RUG410 sp934254675
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH100_bin.32 | 1,447,476 | 95.7% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_4641 | 1,286,477 | 95.51% | 1.075% | Cameroon | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_A_14_1114.128 | 1,452,634 | 93.55% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH100_bin.32_CGC7 | CGCFAM_00359 | Yes | 4 | 1 | |
| GH100_bin.32_CGC5 | CGCFAM_00472 | Yes | 7 | 3 | |
| GH100_bin.32_CGC9 | CGCFAM_00570 | Yes | 3 | 2 | |
| GH100_bin.32_CGC12 | CGCFAM_01598 | Yes | 9 | 1 | |
| GH100_bin.32_CGC3 | CGCFAM_03258 | Yes | 5 | 1 |
Top CAZyme Families