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Cluster: GH100_bin.32_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_504243 k141_504243_13 14482 16956 - GT35
TC k141_504243 k141_504243_14 17135 18490 + 1.B.17.1.5
NULL(UNKNOWN) k141_504243 k141_504243_15 18567 18908 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_504243 k141_504243_16 18979 21618 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
TC k141_504243 k141_504243_17 21629 22267 + 9.B.186.1.1
pfam k141_504243 k141_504243_18 22498 22719 - eIF-1a
TC k141_504243 k141_504243_19 22809 25271 - 3.A.7.7.1
TC k141_504243 k141_504243_20 25291 26412 - 3.A.11.1.3
TC k141_504243 k141_504243_21 26416 27054 - 9.B.31.1.2
Gene ID: k141_504243_13
Type: CAZyme
Location: 14482 - 16956 (-)
Gene ID: k141_504243_14
Type: TC
Location: 17135 - 18490 (+)
Gene ID: k141_504243_15
Type:
Location: 18567 - 18908 (+)
Gene ID: k141_504243_16
Type: pfam
Location: 18979 - 21618 (+)
Gene ID: k141_504243_17
Type: TC
Location: 21629 - 22267 (+)
Gene ID: k141_504243_18
Type: pfam
Location: 22498 - 22719 (-)
Gene ID: k141_504243_19
Type: TC
Location: 22809 - 25271 (-)
Gene ID: k141_504243_20
Type: TC
Location: 25291 - 26412 (-)
Gene ID: k141_504243_21
Type: TC
Location: 26416 - 27054 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
RUG410
→
Species
RUG410 sp934254675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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